PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027366414.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 726aa    MW: 80091.9 Da    PI: 6.1106
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027366414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.28.1e-2062117156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  q+k+WFqN+R++ k
  XP_027366414.1  62 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQVK 117
                     688999**********************************************9877 PP
2START2083.7e-652524711206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el ++ala++p+Wv      e +n+de+l++f+++ +      ++ea r+s+vv+m++++lve+l+d++ qW++ +     +a+tle
  XP_027366414.1 252 ELAVAAMEELTRMALAGDPLWVPGNhgtELLNEDEYLRIFPRGIGpkplgLKSEATRESVVVIMNHTNLVEILMDVN-QWSTVFCgivsRAMTLE 345
                     57899*****************99999999************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp Rd +fvRy++q+++++w++vdvS+d+ ++      + R++++pSg+li++++ng+skvtwvehv+
  XP_027366414.1 346 VLSTGvagnynGALQVMSAEFQVPSPLVPtRDNYFVRYCKQHSDESWAVVDVSLDHLRPSA----ISRSRRRPSGCLIQELPNGYSKVTWVEHVE 436
                     **********************************************************976....79**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r + +l++ lv+sgla+ga++wva l+rqce+
  XP_027366414.1 437 VDDRAVNSLYKLLVNSGLAFGARRWVASLDRQCER 471
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 726 aa     Download sequence    
MYQTNVYDPH QNMIDMSSHK TSSDSELGRN RMGDDYEIRS GNEIMEAPPS GDDQDPNQRP  60
KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ RKELSRELGL EPLQIKFWFQ NKRTQVKAHQ  120
ERQENSILKS ENEKLRAENN RYKEALTNTT CPNCGGPAAL GEMSFDEQHL RIENARLREE  180
IDRMSGVAVK YGKPATSYYN LPSQNNMASR SLDLGVGNYG AQSGMVGEMY GGNDLLRTLP  240
VPTDSDKPMI VELAVAAMEE LTRMALAGDP LWVPGNHGTE LLNEDEYLRI FPRGIGPKPL  300
GLKSEATRES VVVIMNHTNL VEILMDVNQW STVFCGIVSR AMTLEVLSTG VAGNYNGALQ  360
VMSAEFQVPS PLVPTRDNYF VRYCKQHSDE SWAVVDVSLD HLRPSAISRS RRRPSGCLIQ  420
ELPNGYSKVT WVEHVEVDDR AVNSLYKLLV NSGLAFGARR WVASLDRQCE RLASAMATNI  480
PAGDLCVITS HEGRKSMLKL AERMIMSFCT GVGASTAHAW TALTTGCDDV RVMTRKSMDE  540
PGRPPGIVLS AATSLWLPVS SKRVFDFLRD ENSRREWDIL SNGGLVQEMA HIANGRDPGN  600
CVSLLRVNSP NSSQSNMLIL QESCTDSTGS YVVYAPVDIV AMNVVLSGGD PDYVALLPSG  660
FAILPDGPGL NNLGPILDVG SGGCLLTVAF QILVDSAPTA KLSVGSVTTV NSLIKCTVER  720
IKAAVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein