PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366537.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 486aa MW: 52994.8 Da PI: 9.1676

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027366537.1 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12.8	0.00036	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027366537.1 82 WKCEKCSKKYAVQSDWKAHSKTC 104 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS 60 RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 120 DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN 180 NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS 240 KQLQGLMQLP DFQGNTNNSD SSSVAAPSNL FNLSFFPNSN STGTIITDQF NNISGSDQGT 300 TTALYVNNNP AVSDQVGSGF SSLFGANSIV QHENLSSPHM SATALLQKAA QMGSTTTPNG 360 SSLLRGVCSS SNNNGSKSEN GHHTTSLHGL MNSIANGGNT SMFGNENNLF HNVEESHNKL 420 PQNLNVSFGG SDKLTLDFLG VGGVVRNMSG GFSQREQQRV MGTMSSSDPD LKSAQSTQHF 480 GRSTLQ

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS  60
RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  120
DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN  180
NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS  240
KQLQGLMQLP DFQGNTNNSD SSSVAAPSNL FNLSFFPNSN STGTIITDQF NNISGSDQGT  300
TTALYVNNNP AVSDQVGSGF SSLFGANSIV QHENLSSPHM SATALLQKAA QMGSTTTPNG  360
SSLLRGVCSS SNNNGSKSEN GHHTTSLHGL MNSIANGGNT SMFGNENNLF HNVEESHNKL  420
PQNLNVSFGG SDKLTLDFLG VGGVVRNMSG GFSQREQQRV MGTMSSSDPD LKSAQSTQHF  480
GRSTLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	6e-90	C2H2 family protein