PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366541.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-YA

Protein Properties

Length: 310aa MW: 34140.3 Da PI: 9.6056

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	98.4	7.7e-31	155	210	2	58
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p YVNaKQy++I++RRq+Rak+ e+kl +k rkpy+heSRh hA+rRpRg+gGrF XP_027366541.1 155 GPTYVNAKQYHGIIRRRQSRAKAVLENKL-IKRRKPYMHESRHLHAMRRPRGCGGRF 210 79*************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAMQTVYLKE HEGVVHNSVG QLSSATSAPW WSAFGSQSVC GESCGQMKPF SLELPNYVDQ 60 LATGKQSARG VEQLLDRGHT TQFTIFPDDA QSPQATLSLQ SSLAEPRNRF EHGFNQPMIC 120 AKYPYMDQFY GLISTYGPQI SGRIMLPFNL TYDDGPTYVN AKQYHGIIRR RQSRAKAVLE 180 NKLIKRRKPY MHESRHLHAM RRPRGCGGRF LNTRNSTDVN GKSGREVNKN SASQSSEVGT 240 INSSKETNGS SPNISGSEVT SMYSRGGFDN FSVNHLGSTV HSLTGMIDSG HGIIMSTKWG 300 AAGNCCNLKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	188	RRRQSRAKAVLENKLIKRRK
2	169	189	RRRQSRAKAVLENKLIKRRKP
3	170	190	RRRQSRAKAVLENKLIKRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	1e-62	NF-YA family protein