PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027366598.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 255aa    MW: 28487.1 Da    PI: 6.3406
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027366598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC176.62.5e-55801822101
           NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 
                     l+sfw++q   +ek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflv
  XP_027366598.1  80 LQSFWANQyqeVEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 174
                     89*****99899*********************************************************************************** PP

           NF-YC  94 divprdel 101
                     divpr++l
  XP_027366598.1 175 DIVPREDL 182
                     *****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDHQGNGQNP SMGVVGSAQQ LTYGSNPYQG SHITGSPGMV VASPGTIQST GQPGGTQLGQ  60
HQLAYQHMHQ QQQQQLQQRL QSFWANQYQE VEKVTDFKNH SLPLARIKKI MKADEDVRMI  120
SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE  180
DLKDEGLASM PRGTVPVTGP AEALPYCYMP PQHTQIGTTG VPVMVDPYAQ QSHLYNMAPQ  240
MWPQPPEQQQ SSPDH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152158RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.36e-79NF-YC family protein