PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366781.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 439aa MW: 48952.2 Da PI: 9.5304

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	73	95	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027366781.1 73 FVCEICNKGFQRDQNLQLHRRGH 95 89*******************88 PP
2	zf-C2H2	11.8	0.00076	149	171	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027366781.1 149 WKCDKCSKIYAVQSDWKAHSKTC 171 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MFPAVMSNSN SLSEEASVSS GTRIGGLNHV VTNNIYPQQP QKIKKKRSLP GNPDPDAEVI 60 ALSPKTLLAT NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRNSKEVK KRAYVCPEPS 120 CVHHNPSRAL GDLTGIKKHY CRKHGEKKWK CDKCSKIYAV QSDWKAHSKT CGTREYRCDC 180 GTLFSRKDSF ITHRAFCDAL AEESARLTAN QIATTNTNPL VPSLFLFPTQ HNNFQNHITP 240 WDPSQQSPNP SNLTLLHPNI KPEAQNFHIP NNAPFLHQHQ KNMITSPFRD LHVRTSTAAT 300 SAHLSATALL QKAATVGAAA ITGPTQQSHV THLSMSEFGT MTQLDSVPPE RYMNMRGLNT 360 TSNLKNNDRL TRDFLGLTGD TNGGAVDVSI DMKDMLTFTG GSVEYQQQPY EHHHNSIFKS 420 QQGFGFLGTT TAPESWGNC

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MFPAVMSNSN SLSEEASVSS GTRIGGLNHV VTNNIYPQQP QKIKKKRSLP GNPDPDAEVI  60
ALSPKTLLAT NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRNSKEVK KRAYVCPEPS  120
CVHHNPSRAL GDLTGIKKHY CRKHGEKKWK CDKCSKIYAV QSDWKAHSKT CGTREYRCDC  180
GTLFSRKDSF ITHRAFCDAL AEESARLTAN QIATTNTNPL VPSLFLFPTQ HNNFQNHITP  240
WDPSQQSPNP SNLTLLHPNI KPEAQNFHIP NNAPFLHQHQ KNMITSPFRD LHVRTSTAAT  300
SAHLSATALL QKAATVGAAA ITGPTQQSHV THLSMSEFGT MTQLDSVPPE RYMNMRGLNT  360
TSNLKNNDRL TRDFLGLTGD TNGGAVDVSI DMKDMLTFTG GSVEYQQQPY EHHHNSIFKS  420
QQGFGFLGTT TAPESWGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-119	C2H2 family protein