PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366827.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ERF

Protein Properties

Length: 377aa MW: 39726.4 Da PI: 6.039

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	65	1.6e-20	172	221	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_027366827.1 172 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 221 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MCLLTVAHQG GSGSGSGSGK FVRFTSGDEE VEDPFGQEGG SSGPSMGGTG SMVSVPSQVV 60 SGSGSGSGSG SGQINTEWVP GSGYPMMSGF MHVSSPRLSS SSSSAPLLGV GHKRAREDHT 120 VSSQQLIPLY GTATPHFSLP SSSVTEEATT VATTTQGSET ASYEESGERR RRYRGVRQRP 180 WGKWAAEIRD PHKAARVWLG TFDTAEAAAR AYDEAALRFR GNRAKLNFPE NVAAVRPDFP 240 PSTIAVSASP ATHFSPAVMQ GSQFQGSSDF MRDYWEYSQL LRGTGDFHGL EQWFYDSQMA 300 QIQSSSSLLS PSLFLSSSSS QTAFSPSSAS FPLFSSQQMG FFRPPGDSSH GGGDGSGGSE 360 FPPSTWSDTS GYPPPPG

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MCLLTVAHQG GSGSGSGSGK FVRFTSGDEE VEDPFGQEGG SSGPSMGGTG SMVSVPSQVV  60
SGSGSGSGSG SGQINTEWVP GSGYPMMSGF MHVSSPRLSS SSSSAPLLGV GHKRAREDHT  120
VSSQQLIPLY GTATPHFSLP SSSVTEEATT VATTTQGSET ASYEESGERR RRYRGVRQRP  180
WGKWAAEIRD PHKAARVWLG TFDTAEAAAR AYDEAALRFR GNRAKLNFPE NVAAVRPDFP  240
PSTIAVSASP ATHFSPAVMQ GSQFQGSSDF MRDYWEYSQL LRGTGDFHGL EQWFYDSQMA  300
QIQSSSSLLS PSLFLSSSSS QTAFSPSSAS FPLFSSQQMG FFRPPGDSSH GGGDGSGGSE  360
FPPSTWSDTS GYPPPPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	173	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	2e-18	ERF family protein