PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366855.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 287aa MW: 31830 Da PI: 8.4159

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	222	244	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg Fs+ +L+ H ++ H XP_027366855.1 222 QCPQCGAKFSSVTTLVDHVQKvH 244 7******************9988 PP
2	zf-C2H2	16.7	2.1e-05	259	281	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ +L+ H + H XP_027366855.1 259 VCPKCSRGFRDPVSLVEHVERdH 281 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGTPEFPDLG KHCAVSDCKQ IDFLPFTCDR CNQVYCLEHR SYIRHQCTKA DKLDVTVVIC 60 PLCAKGVRLV PDQDPNITWE NHVNTECDPS NYEKVTKKKK CPVPGCREIL VFSNTIKCRD 120 CNVDHCLKHR FGPDHKCPGP KRLETSFSFM SLLNRSRKEE PKPNSSSTST SSKWTASFLN 180 AASNIRASAE AGMSKLSGEI NQAWQTSRDS AGQSRSNGQV EQCPQCGAKF SSVTTLVDHV 240 QKVHERGGNR SGAKVTIDVC PKCSRGFRDP VSLVEHVERD HGGSSRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-132	C2H2 family protein