PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367406.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 477aa MW: 54583.3 Da PI: 6.0439

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.9	3.1e-24	105	204	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ + XP_027367406.1 105 KWTDTMVRLLIMAVYYIGDEGGSDVsdptgkkkstglmQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtSCRVVENQNL 199 7************99999997633455667788899******************************************669999999 PP trihelix 82 fdqle 86 +d ++ XP_027367406.1 200 LDTMD 204 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MESNGLGSGM FSGLLGGVEN PLQQQQQNLP NQQNPHHLHH SQMVSYATHH DTDPHTHLQQ 60 SMKHGYPPFS AKNKQQQSAL SDEDDPVDDS SGDPKRKVSP WQRMKWTDTM VRLLIMAVYY 120 IGDEGGSDVS DPTGKKKSTG LMQKKGKWKS VSRAMMEKGF YVSPQQCEDK FNDLNKRYKR 180 VNDILGKGTS CRVVENQNLL DTMDLAPKMK DEVKKLLNSK HLFFREMCAY HNSCGHGNPT 240 VPQQQVEPGT EVSQSQPQQQ QQQQQQQQQQ RCFHSSENVV ANLGGSGVEG LRMLKAGIGE 300 EDDDDDEDDD SEDYSDDDED DSGEGGSKGQ VGHGHEDEDE NENDGRSIRK KSRKVGGFSM 360 SPQLMQQLSS EVSGVFQDTG KSTWEKKQWM WSKIMQLEEQ KISYQTQAFE LEKQRLKWAR 420 FSSKKEREME RAKLENERRT LENERMVLLI RQKELELLSL QHHQQQQQQQ QQQHSST

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MESNGLGSGM FSGLLGGVEN PLQQQQQNLP NQQNPHHLHH SQMVSYATHH DTDPHTHLQQ  60
SMKHGYPPFS AKNKQQQSAL SDEDDPVDDS SGDPKRKVSP WQRMKWTDTM VRLLIMAVYY  120
IGDEGGSDVS DPTGKKKSTG LMQKKGKWKS VSRAMMEKGF YVSPQQCEDK FNDLNKRYKR  180
VNDILGKGTS CRVVENQNLL DTMDLAPKMK DEVKKLLNSK HLFFREMCAY HNSCGHGNPT  240
VPQQQVEPGT EVSQSQPQQQ QQQQQQQQQQ RCFHSSENVV ANLGGSGVEG LRMLKAGIGE  300
EDDDDDEDDD SEDYSDDDED DSGEGGSKGQ VGHGHEDEDE NENDGRSIRK KSRKVGGFSM  360
SPQLMQQLSS EVSGVFQDTG KSTWEKKQWM WSKIMQLEEQ KISYQTQAFE LEKQRLKWAR  420
FSSKKEREME RAKLENERRT LENERMVLLI RQKELELLSL QHHQQQQQQQ QQQHSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	3e-69	Trihelix family protein