PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367484.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 175aa    MW: 20496.8 Da    PI: 9.115
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.21.1e-232167349
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                     + +sn+qvtfskRr+g++KKA+EL++LCd+ +a+i+fs+ +kl+ +
  XP_027367484.1 21 LDKDSNKQVTFSKRRTGLFKKASELCILCDVHIAIIVFSPADKLFCF 67
                    5789***************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MDMFEQRKKT TGRKKIEIKK LDKDSNKQVT FSKRRTGLFK KASELCILCD VHIAIIVFSP  60
ADKLFCFGEP NIDAIITRYL KGTTEFEAAK SRGKSVSYEE HNKQYEEAMK KLELEKRKLA  120
ETETLAKVWN RVDWWNESID EMSGDQLEQF MVSIYELRRK LAERAGELML MLAML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-30M-type_MADS family protein