PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367531.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 443aa MW: 49791.6 Da PI: 7.5314

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_027367531.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.5	8.4e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027367531.1 67 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQKG 120 IDPVTHKPLS QVENGEDDGR SQEKAPQVSN ELNLLKSESS KSDAASYEQR TSSISPKAHA 180 PEMDGSGSCS SKIYSKCDSN FMTNCYSKDL FLDRFMSSRQ ESYQPSDLMG NFPIQMSYAT 240 TESLPNDSNS SNWFSQTGRP FDMNSEFPFN ATSVLTPTTN MFLPNSFCYK PSLAVPSDNV 300 STAYGSHYWE ASASINSNSS NRSNSSTELR SSSPMNVQNS ILSSWGLADC NTSTKEAQIH 360 MMENHTEEAK WDEYLHIHNP ISMLASVQNQ APESLCNEVK PSMHLVSDTL GAILPHTKQQ 420 ELSQTSSIFS KDIHKLRAAF GHM

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQKG  120
IDPVTHKPLS QVENGEDDGR SQEKAPQVSN ELNLLKSESS KSDAASYEQR TSSISPKAHA  180
PEMDGSGSCS SKIYSKCDSN FMTNCYSKDL FLDRFMSSRQ ESYQPSDLMG NFPIQMSYAT  240
TESLPNDSNS SNWFSQTGRP FDMNSEFPFN ATSVLTPTTN MFLPNSFCYK PSLAVPSDNV  300
STAYGSHYWE ASASINSNSS NRSNSSTELR SSSPMNVQNS ILSSWGLADC NTSTKEAQIH  360
MMENHTEEAK WDEYLHIHNP ISMLASVQNQ APESLCNEVK PSMHLVSDTL GAILPHTKQQ  420
ELSQTSSIFS KDIHKLRAAF GHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	7e-94	MYB family protein