PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367614.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 177aa    MW: 19372.3 Da    PI: 8.4123
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.89.5e-302102196
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C++dC+l+ ++     p++q++++ +v+k+FG++ ++++l+++p ++r+++++sl+yeA  r+ +Pv+Gavg++++++++l+q+
  XP_027367614.1   2 SCNGCRVLRKGCSDDCMLRHCLlwienPQAQAHATVFVAKFFGRAALMSFLSSVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWHLCQM 96 
                     6*********************************************************************************************9 PP

          DUF260  91 kaelal 96 
                      +e +l
  XP_027367614.1  97 GVEKVL 102
                     887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSCNGCRVLR KGCSDDCMLR HCLLWIENPQ AQAHATVFVA KFFGRAALMS FLSSVPANQR  60
SALFQSLLYE AVGRTINPVN GAVGLLWTGN WHLCQMGVEK VLRGGAALTP LPQFSGVDVD  120
AQQVTASERV VVGGGRCPQP KKQRARTPSE ESEMSTLESR TEDCAPQSER KLLTLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.15e-61LBD family protein