PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367890.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 301aa    MW: 34227.2 Da    PI: 7.2833
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.82.5e-1857104148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT +Ed +lv++++ +G g+W+++ar  g++R++k+c++rw++yl
   XP_027367890.1  57 KGPWTVDEDTILVNYITTHGEGHWNSVARSAGLRRSGKSCRLRWLNYL 104
                      79********************************************97 PP
2Myb_DNA-binding49.11.3e-15110153146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+ l++d++ ++G++ W++Ia++++ gRt++++k++w++
   XP_027367890.1 110 RGNITLQEQILILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 153
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MIALMGKLGD EGVRNNNVLR SRKYEEKVHH MDFFIYMINN TPEEKEKEKE IDIGIRKGPW  60
TVDEDTILVN YITTHGEGHW NSVARSAGLR RSGKSCRLRW LNYLRPDVRR GNITLQEQIL  120
ILDLHSRWGN RWSKIAQHLP GRTDNEIKNY WRTRVIKQAK QLKCDVNSTQ FRDALRYVWM  180
PRLLERVQPT PHTLQGPSPN PYGAGVQNGS DSGTECAKAN HFSCAGGAYS DSSSGELQVP  240
SNSDHSDSSG LEKGSGPWAG LSNQIFEQGN GESLESLWND ESIWFLQQLS DEVDIKYNSL  300
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.13e-78MYB family protein