PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367899.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 272aa MW: 31002.7 Da PI: 7.1138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.2e-17	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l + v+ +G g+W++ ar g++Rt+k+c++rw++yl XP_027367899.1 32 KGPWTEEEDSVLSNFVNVHGEGHWNSLARSAGLKRTGKSCRLRWLNYL 79 79********************************************97 PP
2	Myb_DNA-binding	47.9	3.2e-15	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l++d++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_027367899.1 85 RGNITLQEQLLILDLHSRWGNR-WSKIAEQLP-GRTDNEIKNYWRT 128 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
METRRVQVMR SVLDYYDSSA TYGSEEEIVI KKGPWTEEED SVLSNFVNVH GEGHWNSLAR 60 SAGLKRTGKS CRLRWLNYLR PNVRRGNITL QEQLLILDLH SRWGNRWSKI AEQLPGRTDN 120 EIKNYWRTRV VKQARQLKCD VNSKQFRDAV RFVWMPRLVE RIQASCGSGP DQTTLCNTQT 180 QSGVNPIMFS MVSSYSSGVD VQPPSLSHTS TSTSYNLMGG SSWSSDSVEK GFMSTPHIDM 240 QAFEPGNGFG DADLLWTDEN IWFLQQHLAD DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	2e-77	MYB family protein