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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_027367988.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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| Family | ERF | ||||||||
| Protein Properties | Length: 143aa MW: 16015.2 Da PI: 6.7608 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 47.3 | 5.2e-15 | 23 | 64 | 3 | 48 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
y GVr ++ +gr++Ae r p++ + r++lg+f+taeeAa a++
XP_027367988.1 23 YLGVRKRP-WGRYAAEFRNPYT---KERHWLGTFDTAEEAAIAYDL 64
77******.*******999765...5******************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 143 aa Download sequence |
MENLPPLIYK HPIRRTSRRS TMYLGVRKRP WGRYAAEFRN PYTKERHWLG TFDTAEEAAI 60 AYDLSSINIC GIDNARTNFH YPFASLPPPP LLIPPPPPPP PTPKLDPSVG LCPEIDAAYD 120 GDDESLIIAS ILQCFSNSGN CSF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G12890.1 | 4e-26 | ERF family protein | ||||




