PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368069.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 211aa MW: 23400.8 Da PI: 8.0536

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.3	2.5e-38	17	117	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkCa dC++apyf+++q ++kfa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l XP_027368069.1 17 PCGACKFLRRKCAIDCIFAPYFCSQQgAAKFAAIHKVFGASNVSKLLFHIPAHHRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVACLQAQL 111 7*********************9989****************************************************************9 PP DUF260 95 allkee 100 ++k++ XP_027368069.1 112 IHMKAQ 117 988877 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MAFSTGNGTT TTGSGSPCGA CKFLRRKCAI DCIFAPYFCS QQGAAKFAAI HKVFGASNVS 60 KLLFHIPAHH RCEAVVTITY EAQARIRDPV YGCVSHIFAL QQQVACLQAQ LIHMKAQLAQ 120 NLMESRNLEN QWSGNVVGQQ FNPFCPISMN PISPLSSLDS IDYSKIRDCM STHDVQRKED 180 FSFQACSKKI SYDNDLGELQ ELALRMMGNY N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	5e-59	LBD family protein