PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368297.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 281aa    MW: 31892.4 Da    PI: 6.404
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.29e-191661147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg WT+ Ede+l+ +vkq+G  +W++Ia+ ++ gRt+k+c++rw + 
   XP_027368297.1 16 RGHWTPAEDEKLLLLVKQYGAQNWNSIAENLQ-GRTGKSCRLRWCNQ 61
                     899*****************************.***********985 PP
2Myb_DNA-binding52.89.2e-1768112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r+++T+eE+e+l+ a++ +G++ W+ Ia+ ++ gRt++ +k+ w+  
   XP_027368297.1  68 RNPFTEEEEERLLIAHHIYGNR-WAHIAKLFP-GRTDNAVKNQWHVT 112
                      789*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEDILAPGED TKTCPRGHWT PAEDEKLLLL VKQYGAQNWN SIAENLQGRT GKSCRLRWCN  60
QLDPRLNRNP FTEEEEERLL IAHHIYGNRW AHIAKLFPGR TDNAVKNQWH VTMSRKRREQ  120
SKKRSFDDLH RDSKGTKSHD PLVSSRVDLE NARSFDFNDL NSEENRFASL CPNGSLTFKF  180
GCMPSFANTL PLVYSIGKEG SDLFKYLSSQ SSEAFDGSTK FMTPKDNSVD DGRMKSECDD  240
SSATTKLNAS SILQEQADES SNFERKEVTF FDFLGVGVSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.16e-54MYB family protein