PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368343.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 210aa MW: 23689.2 Da PI: 5.2374

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.3	2.6e-38	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaC+++rr+C ++C+l+ yfp++++ +f n+h+lFG+ +++++lk+l++++r++a+s+++ye+++ra dPv G+++vi++lq+q+e+++ael+ XP_027368343.1 11 ACAACRFQRRRCGTHCILSSYFPNDRQDQFINAHRLFGVGRITNMLKTLDPQNRDAAASAIIYESDMRAIDPVGGCHRVIQQLQSQIESTEAELH 105 7********************************************************************************************** PP DUF260 96 llkee 100 l++++ XP_027368343.1 106 LVRQN 110 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MESHIPRVKD ACAACRFQRR RCGTHCILSS YFPNDRQDQF INAHRLFGVG RITNMLKTLD 60 PQNRDAAASA IIYESDMRAI DPVGGCHRVI QQLQSQIEST EAELHLVRQN LAFFKAQGSS 120 GNIINAAPQP NLESMPQELQ QQQHVSYNPS QEDINMWALL NSIPLSHLSL EDNQESVVDS 180 WHDDQEPALD SMNEMNSDAG SHHQANQKEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	1e-30	LBD family protein