PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368344.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 203aa MW: 22841.4 Da PI: 5.1778

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.1	7.9e-40	13	112	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaC+++rr+C ++Cvlapyfp++++++f n+h+lFG+ +++++lk+l++++r++a+s+++y++++ra dPv G++++i++lq+q+e+++ael+ XP_027368344.1 13 ACAACRFQRRRCGSNCVLAPYFPHDRQNQFLNAHRLFGVGRITNMLKTLDPQNRDIAASTIIYQSDMRAIDPVGGCYSLIHHLQSQIESTEAELH 107 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_027368344.1 108 LVLQH 112 98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MESNLSTSNN TQACAACRFQ RRRCGSNCVL APYFPHDRQN QFLNAHRLFG VGRITNMLKT 60 LDPQNRDIAA STIIYQSDMR AIDPVGGCYS LIHHLQSQIE STEAELHLVL QHLASFKAQA 120 SSGNIINGTP QSYLESMPLE LQQQQQQYVS YNPSQEDINT WALQNSIPLS HLSIEDNQEP 180 VVDSGYDDQK PVLDFMNKIN SDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	1e-35	LBD family protein