PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368408.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 261aa    MW: 29154.7 Da    PI: 9.8185
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2156.9e-0583105123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C+k F+++  L  H++ H
  XP_027368408.1  83 FSCKFCNKKFPSSQALGGHQNAH 105
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSEQFVRDVE SKKLKHKIDE SPAMDAVDSE LLLSLSLGNN KGESSSKFTS KSLIAHEGSS  60
SSFAPKLVEN NNHQLFKPKQ RQFSCKFCNK KFPSSQALGG HQNAHRRERV LSRMDKEFEM  120
GTFGLGAHFC PYSTIAHQHH PLGGSPSLYH GTHMHPMPHM SWPHFVPSYG NQGLHKTSIP  180
RHQFGMTNPW GVPTKTPHAQ TSQNLYLRDV VDSQHNQVPS LDASNRATMA HSGIGNLLGN  240
QYTGNHQLTS SRSNCNNMQF Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.16e-12C2H2 family protein