PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368497.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 218aa MW: 24347.3 Da PI: 6.1554

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.4	1.2e-38	7	105	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC++dCv+apyf ++ p +fa+vhk++Gasnv+kll++lp ++r+da+ ++ yeA ar++dP+yG+v++i +lqqq+++l++e+ XP_027368497.1 7 SCGACKFLRRKCTRDCVFAPYFSYDEaPTHFAAVHKIYGASNVSKLLSHLPIHNRSDAAITISYEALARMQDPIYGCVAHIYALQQQVASLQEEI 101 6*******************998879****************************************************************9 PP DUF260 95 allk 98 ++l+ XP_027368497.1 102 DTLG 105 8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MTGFSSSCGA CKFLRRKCTR DCVFAPYFSY DEAPTHFAAV HKIYGASNVS KLLSHLPIHN 60 RSDAAITISY EALARMQDPI YGCVAHIYAL QQQVASLQEE IDTLGSLMAN SKVSVVNCGS 120 VQPPMNSNNG IHSILQHDDT RTQYYQNQMA NFLSQEGSAT VYQSLDKQMD IELPNVHGFE 180 ESSFGDCNPN PLEQFLSGID QEVFMNHPWF KHNANIKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06080.1	3e-58	LBD family protein