PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368515.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 247aa    MW: 27714.7 Da    PI: 6.4054
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.4e-171964147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+ +Ed  l+++v q+G+++W+ I++ ++ gR++k+c++rw + 
   XP_027368515.1 19 KGSWSSQEDATLLKLVDQHGPRNWSIISSGIP-GRSGKSCRLRWCNQ 64
                     799*****************************.***********985 PP
2Myb_DNA-binding56.56.3e-1873115347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+ Ed++++da++ +G++ W+tI+r ++ gRt++ +k++w++ 
   XP_027368515.1  73 PFTPSEDKIIIDAHAVHGNK-WATISRLLP-GRTDNAIKNHWNST 115
                      89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDANSNCNGG GSDGSDRVKG SWSSQEDATL LKLVDQHGPR NWSIISSGIP GRSGKSCRLR  60
WCNQLSPEVQ HRPFTPSEDK IIIDAHAVHG NKWATISRLL PGRTDNAIKN HWNSTLRRRR  120
MAEQSPTSVS SASSPGKRPS SLEPNYPLKK PCVDEVSMET EDERTEEFSQ LASPVTTSLS  180
LLPPGEKTEK DEEEFEENTK TDDQTYFMET LRRMIADEVR NHVESLRRDR ESFSHGTGLD  240
LNPKLPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.12e-43MYB family protein