PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368768.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 172aa MW: 19372.8 Da PI: 8.7047

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_027368768.1 43 FSCNYCQRKFYSSQALGGHQNAH 65 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MSFHPNTSLH LSQPDENHLN LALLLEPSSS SPSPISPIEP RIFSCNYCQR KFYSSQALGG 60 HQNAHKLERT LAKKSRELNS TMQPYGGPEQ RSNFTASHPF SHALGVLDSQ GQSLRLGGRK 120 DFSYGSKEGV ASWSRGYTSE HVQEDISQLD LSLRFLIINE LFFFVKKMQF VL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	9e-26	C2H2 family protein