PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368800.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 358aa MW: 40715.5 Da PI: 7.2239

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	139.2	3.4e-43	113	255	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec....eaesssssasns 85 k+drhski T++g+RdRR+Rls+e+a+ fF Lqd+LGfdk+skt+eWLl+qak +ik+l++ s+ss sec + ++ ++s+ n+ XP_027368800.1 113 SKRDRHSKINTARGLRDRRMRLSLEVAKSFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLVREksgggaakSASSTSECegvsSLDEVVVSGVNQ 207 69***********************************************************99999877666667886554222222222233 PP TCP 86 ssg.kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134 +++ + + +sk +ksa + + kesr+kar+rarertrekmr++n XP_027368800.1 208 EQErEPHVKRRTSKLCRKSAF--NPIGKESREKARERARERTREKMRTRN 255 333133333334444444444..77778*****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MYSSNTSLNG NDLISYPNQP FCFRPFSFES NPTYNSSKEE TNSNYALPPP PLSFFQFPFE 60 DNIFLEQHHD LLLHHHQSLA DPPLVNMELP PIIPCAQGTT TTMMDHTPRK RSSKRDRHSK 120 INTARGLRDR RMRLSLEVAK SFFGLQDMLG FDKASKTVEW LLNQAKVEIK QLVREKSGGG 180 AAKSASSTSE CEGVSSLDEV VVSGVNQEQE REPHVKRRTS KLCRKSAFNP IGKESREKAR 240 ERARERTREK MRTRNLNRLS SWNPFETVEE SAGTQSQSVN HPSLDVQLAE AEEPSSHAKE 300 HLGTVEDMAH EDNSLVIMSK WSPTVMFNSL NNPAILQEHQ YAEFQSLGKS WEAYNNHI

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MYSSNTSLNG NDLISYPNQP FCFRPFSFES NPTYNSSKEE TNSNYALPPP PLSFFQFPFE  60
DNIFLEQHHD LLLHHHQSLA DPPLVNMELP PIIPCAQGTT TTMMDHTPRK RSSKRDRHSK  120
INTARGLRDR RMRLSLEVAK SFFGLQDMLG FDKASKTVEW LLNQAKVEIK QLVREKSGGG  180
AAKSASSTSE CEGVSSLDEV VVSGVNQEQE REPHVKRRTS KLCRKSAFNP IGKESREKAR  240
ERARERTREK MRTRNLNRLS SWNPFETVEE SAGTQSQSVN HPSLDVQLAE AEEPSSHAKE  300
HLGTVEDMAH EDNSLVIMSK WSPTVMFNSL NNPAILQEHQ YAEFQSLGKS WEAYNNHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	4e-21	TCP family protein