PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368879.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

FAR1

Protein Properties

Length: 640aa MW: 73960.6 Da PI: 7.1872

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.1	2.3e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk + +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_027368879.1 68 EYYGNFARKNGFSIRKERSRISPQLG-IYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVvegVSQWFVVQFSNVHNHELL 159 59******************8888.****************9******************99877789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MTSIPSKNLW IRRQQCPCGD WKCYITYEGD AEEGSTPPEL VKAEKASSAA MITPYVGMVF 60 KSDDDAFEYY GNFARKNGFS IRKERSRISP QLGIYKRDFV CYRSGFAPVK KKPNGEHHRD 120 RKSVRCGCDA KMYLSKEVVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKMLEL EKGIQGGQLP FLERDVRNFV QNRKKVVQEN EALLSEKREN 240 DILELLEACK DSYGRTIFFG CVLLQDETPQ SFSWALQTFV RFMRGRCPQT ILTDLEPGLR 300 DAIRSEFPGT KHVIPQWNIL YKLPSWFSLR LGSRYAEFKS EFDALFHIES TEDFELQWSQ 360 MISVFELGSD KHTDLLFSVR ASWAQSYVRG YFLAQMVTIA YSKSIDAFLK GIFTTHTCLP 420 LLLSCCSNDF LPSCILKVGI SASFQRQAHQ ETQYIHLKTC IPIEEHARSI LTPFAFNALQ 480 QELLLAMQYA TSEMANGSYI VRHFKRMDGG RLVIWLAEDE QIHCSCKEFE SSGILCRHAL 540 RVFVIKNYFQ LPDKYFLSRW RRECSLLIDD DHNNQGIGGD WFQEYQSLAE TLFSESSITK 600 ERSDYARKEL TKELTRILNE VRNMPETDAV CMTMTVSPAS

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MTSIPSKNLW IRRQQCPCGD WKCYITYEGD AEEGSTPPEL VKAEKASSAA MITPYVGMVF  60
KSDDDAFEYY GNFARKNGFS IRKERSRISP QLGIYKRDFV CYRSGFAPVK KKPNGEHHRD  120
RKSVRCGCDA KMYLSKEVVE GVSQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKMLEL EKGIQGGQLP FLERDVRNFV QNRKKVVQEN EALLSEKREN  240
DILELLEACK DSYGRTIFFG CVLLQDETPQ SFSWALQTFV RFMRGRCPQT ILTDLEPGLR  300
DAIRSEFPGT KHVIPQWNIL YKLPSWFSLR LGSRYAEFKS EFDALFHIES TEDFELQWSQ  360
MISVFELGSD KHTDLLFSVR ASWAQSYVRG YFLAQMVTIA YSKSIDAFLK GIFTTHTCLP  420
LLLSCCSNDF LPSCILKVGI SASFQRQAHQ ETQYIHLKTC IPIEEHARSI LTPFAFNALQ  480
QELLLAMQYA TSEMANGSYI VRHFKRMDGG RLVIWLAEDE QIHCSCKEFE SSGILCRHAL  540
RVFVIKNYFQ LPDKYFLSRW RRECSLLIDD DHNNQGIGGD WFQEYQSLAE TLFSESSITK  600
ERSDYARKEL TKELTRILNE VRNMPETDAV CMTMTVSPAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein