PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051193.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 178aa    MW: 20016.3 Da    PI: 10.0316
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.91.1e-183278148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +  WT eEd++l+++v+q+G + W+ Ia+ m  gR +kqc++rw+++l
   XP_028051193.1 32 KEQWTDEEDKKLLNLVTQHGVRKWAQIAENMV-GRAGKQCRERWHNHL 78
                     568*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGLSEDDKST ERNCKGVAKR AKCGSSTTTL IKEQWTDEED KKLLNLVTQH GVRKWAQIAE  60
NMVGRAGKQC RERWHNHLRP DIKAEIAKRI PGRTENSIKN HWNATKREQN SKRNNIKKPQ  120
GSQNGKSQSL PSILQDYIKS MNPSNRAATT TGSTVTEDFS THFAPLEDLS DSSIDDSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.14e-46MYB family protein