PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051249.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 996aa MW: 111116 Da PI: 6.0751

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.2	1.8e-54	12	128	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwlk+ e++ iL+n+++ ++t+e++++p sgsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+fq XP_028051249.1 12 VQEaQRRWLKPAEVLFILQNYQEDQITNEPAKKPASGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNAEALNCYYAHGEQNPKFQ 106 667699*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rr+yw+L++++e+ivlvhy+++ XP_028051249.1 107 RRSYWMLDQAYEHIVLVHYRDT 128 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 996 aa Download sequence
MAQSGYNIND LVQEAQRRWL KPAEVLFILQ NYQEDQITNE PAKKPASGSL FLFNKRVLRF 60 FRKDGHSWRK KKDGRTVGEA HERLKVGNAE ALNCYYAHGE QNPKFQRRSY WMLDQAYEHI 120 VLVHYRDTDE GKHSSETISQ LSTGSPSTFN QSPSSFTAQH PGSTAVITEL YEPYQSPGSV 180 EVSSDAVIKN NGMDHIDGIK RMGEISGSSE PEVTQTLQRL KEQLSLDDGN LEEILPFRTE 240 IENSNDSEYI INGQCRPAAS PDDLDNLVLQ RESGGNGKHN HKALAQEFTV EREDSLYWKE 300 MLESYQSSPR AQFQEKNLRT LDGNGMLLPD SSKSLPKVQE GCHLINFGGH NLLKCDDFLT 360 LGSNTNQQLS APSSESPLAL PDSMSLSEGV KNFNFPAYSP ETNIRHTEPN YFTTLFDLDL 420 DTDTSLTIAQ KQKFTIREIS PEWGYAFEAT KVVIVGSFLC NPSEAAWTCM FGDIEVPVQI 480 IQEGVICCQA PPHLPGKVTL CITSGNRESC SEVREFDYRV SQSICAHCSS SQKETTKSPE 540 ELPLLVRFVQ MLLSDPLVQN EDFTGSGIDL LGKFKAGEDS WVQVIEALLD GSWTSSSTTD 600 WLLQELLKDK LQQWLSSRSQ GGCDQQGCSL SKKEQGVLHM VAGLGFEWAL NPILNSGVGV 660 NFRDINGWTA LHWAARFGRE KIVATLIASG ASAGAVTDPN SRDPIGKTPA SIAATFGHKG 720 LAGYLSEVAL TSHLSSLTLK ESELSKGSAD VEAENAVNSI SQMSLSINED QLSLKDTLAA 780 VRNATQAASR IQAAFRAHSF RKRQQREAAS VDEYGILSNE IPELSSKLAF RNARDYNTAA 840 LSIQKKYRGW KGRKDFLAIR HKVVKIQAHV RGHQVRKQYK IICWAVSVLE KVIIRWRRKG 900 VGLRGFRPEM ESIDESDDEE DILKVFRKQK VHGAIDEAVS RVLSMVESPE ARHQYRRLLA 960 RYHQAKAEVG AAESEITLTS QSDVSSMENE DSPWYP

Sequence ? help Back to Top

Protein Sequence Length: 996 aa Download sequence

MAQSGYNIND LVQEAQRRWL KPAEVLFILQ NYQEDQITNE PAKKPASGSL FLFNKRVLRF  60
FRKDGHSWRK KKDGRTVGEA HERLKVGNAE ALNCYYAHGE QNPKFQRRSY WMLDQAYEHI  120
VLVHYRDTDE GKHSSETISQ LSTGSPSTFN QSPSSFTAQH PGSTAVITEL YEPYQSPGSV  180
EVSSDAVIKN NGMDHIDGIK RMGEISGSSE PEVTQTLQRL KEQLSLDDGN LEEILPFRTE  240
IENSNDSEYI INGQCRPAAS PDDLDNLVLQ RESGGNGKHN HKALAQEFTV EREDSLYWKE  300
MLESYQSSPR AQFQEKNLRT LDGNGMLLPD SSKSLPKVQE GCHLINFGGH NLLKCDDFLT  360
LGSNTNQQLS APSSESPLAL PDSMSLSEGV KNFNFPAYSP ETNIRHTEPN YFTTLFDLDL  420
DTDTSLTIAQ KQKFTIREIS PEWGYAFEAT KVVIVGSFLC NPSEAAWTCM FGDIEVPVQI  480
IQEGVICCQA PPHLPGKVTL CITSGNRESC SEVREFDYRV SQSICAHCSS SQKETTKSPE  540
ELPLLVRFVQ MLLSDPLVQN EDFTGSGIDL LGKFKAGEDS WVQVIEALLD GSWTSSSTTD  600
WLLQELLKDK LQQWLSSRSQ GGCDQQGCSL SKKEQGVLHM VAGLGFEWAL NPILNSGVGV  660
NFRDINGWTA LHWAARFGRE KIVATLIASG ASAGAVTDPN SRDPIGKTPA SIAATFGHKG  720
LAGYLSEVAL TSHLSSLTLK ESELSKGSAD VEAENAVNSI SQMSLSINED QLSLKDTLAA  780
VRNATQAASR IQAAFRAHSF RKRQQREAAS VDEYGILSNE IPELSSKLAF RNARDYNTAA  840
LSIQKKYRGW KGRKDFLAIR HKVVKIQAHV RGHQVRKQYK IICWAVSVLE KVIIRWRRKG  900
VGLRGFRPEM ESIDESDDEE DILKVFRKQK VHGAIDEAVS RVLSMVESPE ARHQYRRLLA  960
RYHQAKAEVG AAESEITLTS QSDVSSMENE DSPWYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein