PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051400.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 198aa    MW: 23061.2 Da    PI: 9.7287
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.41e-2266157190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+YA+ +GFsvr+s+++   +n+ + +r++vCs+eg re++  +  e+ r++raetr  C a+++v+ +k  +k++vt+++ eHnH+la
  XP_028051400.1  66 SFYNAYARVIGFSVRRSRKRICGDNKFVESRKWVCSREGVREKKYLQrVERVRTPRAETRLFCSATFRVRYDKtIKKYVVTHFVGEHNHPLA 157
                     5*****************************************9988846777889*****************999***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MTDEPESSRQ KEVNSKIDNQ VAPDGKDDVV DGKEEGLASQ TYDSLRMHTE VDVLQMKFNS  60
EEDAYSFYNA YARVIGFSVR RSRKRICGDN KFVESRKWVC SREGVREKKY LQRVERVRTP  120
RAETRLFCSA TFRVRYDKTI KKYVVTHFVG EHNHPLAAPH CVPFLWSHRF VTSADKAQAK  180
AMRNVGMRTS QIMDFMVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein