PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051657.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 399aa MW: 44999.6 Da PI: 9.2221

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	64.6	1.4e-20	20	92	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn.......liekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYDi+NVLe+++ ++++k+kn+++wkg XP_028051657.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGgfdnfiqVLARKAKNRYSWKG 92 79***************999********.....************8622222226666******98 PP
2	E2F_TDP	74.6	1e-23	160	244	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + + k+RR+YDi+NVL+++n iek ++k+++rw g XP_028051657.1 160 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsmmrnNSAAKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 244 79****************************************9977789****************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI 60 YDIVNVLESI GGFDNFIQVL ARKAKNRYSW KGFGGVPKTL QQLREEGLRE NFNTFNGNNY 120 VKVSDDDEDE KISNPITSQN DKLNPSSVTK SSTASKTDNR KEKSLGLLTQ NFVKLFLCSN 180 VDLISLEEAA KILLGDAHDP SMMRNNSAAK VRRLYDIANV LSSMNFIEKT HHPETRKPAF 240 RWLGTRGKSD NGSANTSVLN ESKKRIFGTE ITNTSFKRTK VVSTIDENSK QITKTHLQML 300 VKCEDLENEV DKSNFEQDLR HSSKNFQFGP FAPVTVHVSK FGATQNSTVK QVHDWESLAS 360 TYRPQYYNQA LRDLFAHYVE AWKSWCSEVA GKNPIQLIS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI  60
YDIVNVLESI GGFDNFIQVL ARKAKNRYSW KGFGGVPKTL QQLREEGLRE NFNTFNGNNY  120
VKVSDDDEDE KISNPITSQN DKLNPSSVTK SSTASKTDNR KEKSLGLLTQ NFVKLFLCSN  180
VDLISLEEAA KILLGDAHDP SMMRNNSAAK VRRLYDIANV LSSMNFIEKT HHPETRKPAF  240
RWLGTRGKSD NGSANTSVLN ESKKRIFGTE ITNTSFKRTK VVSTIDENSK QITKTHLQML  300
VKCEDLENEV DKSNFEQDLR HSSKNFQFGP FAPVTVHVSK FGATQNSTVK QVHDWESLAS  360
TYRPQYYNQA LRDLFAHYVE AWKSWCSEVA GKNPIQLIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-120	E2F/DP family protein