PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051661.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 381aa MW: 42872.3 Da PI: 9.4008

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	64.7	1.3e-20	20	92	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn.......liekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYDi+NVLe+++ ++++k+kn+++wkg XP_028051661.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGgfdnfiqVLARKAKNRYSWKG 92 79***************999********.....************8622222226666******98 PP
2	E2F_TDP	74.7	9.7e-24	142	226	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + + k+RR+YDi+NVL+++n iek ++k+++rw g XP_028051661.1 142 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsmmrnNSAAKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 226 79****************************************9977789****************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI 60 YDIVNVLESI GGFDNFIQVL ARKAKNRYSW KGFGGVPKTL QQLRVSDDDE DEKISNPITS 120 QNDKLNPSSV TKSSTASKTD NRKEKSLGLL TQNFVKLFLC SNVDLISLEE AAKILLGDAH 180 DPSMMRNNSA AKVRRLYDIA NVLSSMNFIE KTHHPETRKP AFRWLGTRGK SDNGSANTSV 240 LNESKKRIFG TEITNTSFKR TKVVSTIDEN SKQITKTHLQ MLVKCEDLEN EVDKSNFEQD 300 LRHSSKNFQF GPFAPVTVHV SKFGATQNST VKQVHDWESL ASTYRPQYYN QALRDLFAHY 360 VEAWKSWCSE VAGKNPIQLI S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI  60
YDIVNVLESI GGFDNFIQVL ARKAKNRYSW KGFGGVPKTL QQLRVSDDDE DEKISNPITS  120
QNDKLNPSSV TKSSTASKTD NRKEKSLGLL TQNFVKLFLC SNVDLISLEE AAKILLGDAH  180
DPSMMRNNSA AKVRRLYDIA NVLSSMNFIE KTHHPETRKP AFRWLGTRGK SDNGSANTSV  240
LNESKKRIFG TEITNTSFKR TKVVSTIDEN SKQITKTHLQ MLVKCEDLEN EVDKSNFEQD  300
LRHSSKNFQF GPFAPVTVHV SKFGATQNST VKQVHDWESL ASTYRPQYYN QALRDLFAHY  360
VEAWKSWCSE VAGKNPIQLI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-112	E2F/DP family protein