PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051662.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 374aa MW: 42050.4 Da PI: 9.5336

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	76.3	3e-24	20	85	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg XP_028051662.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGVLARKAKNRYSWKG 85 79***************999********.....****************************98 PP
2	E2F_TDP	74.7	9.3e-24	135	219	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + + k+RR+YDi+NVL+++n iek ++k+++rw g XP_028051662.1 135 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsmmrnNSAAKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 219 79****************************************9977789****************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI 60 YDIVNVLESI GVLARKAKNR YSWKGFGGVP KTLQQLRVSD DDEDEKISNP ITSQNDKLNP 120 SSVTKSSTAS KTDNRKEKSL GLLTQNFVKL FLCSNVDLIS LEEAAKILLG DAHDPSMMRN 180 NSAAKVRRLY DIANVLSSMN FIEKTHHPET RKPAFRWLGT RGKSDNGSAN TSVLNESKKR 240 IFGTEITNTS FKRTKVVSTI DENSKQITKT HLQMLVKCED LENEVDKSNF EQDLRHSSKN 300 FQFGPFAPVT VHVSKFGATQ NSTVKQVHDW ESLASTYRPQ YYNQALRDLF AHYVEAWKSW 360 CSEVAGKNPI QLIS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI  60
YDIVNVLESI GVLARKAKNR YSWKGFGGVP KTLQQLRVSD DDEDEKISNP ITSQNDKLNP  120
SSVTKSSTAS KTDNRKEKSL GLLTQNFVKL FLCSNVDLIS LEEAAKILLG DAHDPSMMRN  180
NSAAKVRRLY DIANVLSSMN FIEKTHHPET RKPAFRWLGT RGKSDNGSAN TSVLNESKKR  240
IFGTEITNTS FKRTKVVSTI DENSKQITKT HLQMLVKCED LENEVDKSNF EQDLRHSSKN  300
FQFGPFAPVT VHVSKFGATQ NSTVKQVHDW ESLASTYRPQ YYNQALRDLF AHYVEAWKSW  360
CSEVAGKNPI QLIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-115	E2F/DP family protein