PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051668.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 185aa    MW: 20334.9 Da    PI: 6.7466
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.53e-4510108199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C+++pyfp e+p+kfanvhk+FGasnv+kll++lp+++reda++sl+yeAear+rdPvyG+vg i+ lq+q+e+l++el+
  XP_028051668.1  10 PCAACKFLRRKCMPGCIFSPYFPPEEPQKFANVHKIFGASNVTKLLNELPPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVERLQKELD 104
                     7********************************************************************************************99 PP

          DUF260  96 llke 99 
                      +++
  XP_028051668.1 105 DANA 108
                     8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MASSSSYNSP CAACKFLRRK CMPGCIFSPY FPPEEPQKFA NVHKIFGASN VTKLLNELPP  60
HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVERLQ KELDDANADL IRYACNEIQT  120
ALPVVAHPPP PAVRPVEFTR RMGGNEVGGA DFYQNPSFPY PYPLPWNDNN SSSGDITRGG  180
GGGNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.24e-73LBD family protein