PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051864.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 172aa    MW: 20093.5 Da    PI: 7.2344
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.71.8e-132887148
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............t 48
                    +fYn+Y+ +vGFs rk++ +++k+++eit+rtfvC+ke +r  +k++            t
  XP_028051864.1 28 DFYNTYGGNVGFSSRKAYANRNKHTKEITSRTFVCYKERSRGIDKRDplvknprqelhqT 87
                    6****************************************9999986655554444331 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEENNIVDDC GWKPKVGMPF DFEQAAYDFY NTYGGNVGFS SRKAYANRNK HTKEITSRTF  60
VCYKERSRGI DKRDPLVKNP RQELHQTGPM SNKAPKTIFT DQHAAMANTN HRLCTWHLMQ  120
NAVKHVSSVF NDVGVKAVFS KFMHDIDDEE EFRMQWNQML DKYDAFDNHC LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-10FAR1 family protein