PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051873.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 309aa    MW: 36026 Da    PI: 8.295
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.24.3e-2636122189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYn+Y+k +GFs+r+++++ksk++g +++r+fvC k+g+++++++     +++r+ trt+Cka + v++++  +kw+vtk++  HnH +
  XP_028051873.1  36 QFYNKYGKIMGFSIRRDYHTKSKKDGIMVNRKFVCCKQGEKDKRSEM---VKQPRQDTRTNCKAFMYVSLDReLSKWVVTKFDDTHNHIM 122
                     6****************************************999877...999*****************9989**************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEVDGLERSI EDNARLLKEH TPSLGTEFES EEIAYQFYNK YGKIMGFSIR RDYHTKSKKD  60
GIMVNRKFVC CKQGEKDKRS EMVKQPRQDT RTNCKAFMYV SLDRELSKWV VTKFDDTHNH  120
IMHLPQCAHM MPSQRKVSEA QGINMELADA TGLSLKASHD LISTQAGGKE FVGFTREDQK  180
SYLRIKRQRD LQYGKAGTLL RYFQKQAANN PYFYYAVQLD VDEMITNIFW ADHQMIIDYE  240
NFGDAVSFDT TFRTNKEYRT FALFTSFNHF RMTMIFGAAL LYDETTASFA WLFETFLHAM  300
SGKKPSTIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-66FAR1 family protein