PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051882.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 241aa MW: 28232.7 Da PI: 6.687

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.2e-18	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT++Ed+ll ++v +G g+W+++a+ g++R++k+c++rw +yl XP_028051882.1 18 KRPWTPDEDKLLTEYVSSHGEGRWSSVAKSSGLNRSGKSCRLRWVNYL 65 579*******************************************97 PP
2	Myb_DNA-binding	51.7	2.1e-16	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r + T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ XP_028051882.1 71 RSKITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 115 6788****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MDGLMMGWGL PAEQGWRKRP WTPDEDKLLT EYVSSHGEGR WSSVAKSSGL NRSGKSCRLR 60 WVNYLKPGLK RSKITPQEEG IIIELHALWG NKWSTIARYL PGRTDNEIKN YWRTHFKKRG 120 KPSQKQEKGK TQLLLDQQIM KQEQQEQQEE EQGENDNDIN NKVLSQAEAI DQKMTDEKQG 180 KQETLLFMYP NMENLCFPMM YQDIASWSHT MDDLWSGGLW NLDEPHGRVD QANDYNKINW 240 N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	2e-69	MYB family protein