PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051900.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 212aa    MW: 23770.9 Da    PI: 9.3056
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.35.6e-313893359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    ++rY+eClkNhAa++Gg+a+DGCgEfmp  gee t +alkC+AC+CHRnFHR+e + 
  XP_028051900.1 38 ATRYRECLKNHAAAIGGNATDGCGEFMPG-GEEDTLEALKCSACNCHRNFHRKEIQG 93
                    689*************************9.8888*******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSISSQEREN GNGSQNAISS DLATFRSAEG QRPPYMEATR YRECLKNHAA AIGGNATDGC  60
GEFMPGGEED TLEALKCSAC NCHRNFHRKE IQGHDHCFRY RLNTVGVGPE LVGYPTTGPH  120
QMIMPCKIRY PTSSSGDDQG VKKRFRTKFS KEQKEKMLGF AEKAGWKIQK LEESVVQQFC  180
QEIGIKRRVL KVWMHNNKHS LAKKNALAST TT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.18e-66ZF-HD family protein