PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052081.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 426aa MW: 48271.9 Da PI: 10.0773

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.6	3.2e-12	12	56	1	46
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwd 46 lp+G+r +Ptdeel+++yLk k++g++ ++ +vi+e+d+yk+eP++ XP_028052081.1 12 LPVGYRLRPTDEELINHYLKLKINGDEKQV-SVIREIDVYKCEPSE 56 799**********************999.99*********75 PP
2	NAM	149.8	1.3e-46	59	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptde +++yLk k++g++ ++ +vi+e+++ k+ePwdLp k ++k++++ew+fF+++d+ky++g++ nr+t +gyWkatgkd ++ XP_028052081.1 59 LPVGYRFRPTDEVRINHYLKLKINGDEKQV-SVIREINVWKCEPWDLPdKsAIKTNDEEWFFFCPKDRKYQNGHQLNRVTVAGYWKATGKDSSIR 152 799**********************999.99**********96358888999********************************9 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kktLvfy gra++g++t+Wv+heyr+ XP_028052081.1 153 SLrRTTVIGMKKTLVFYAGRASNGQRTNWVIHEYRA 188 9757788*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MSLSKILAEE SLPVGYRLRP TDEELINHYL KLKINGDEKQ VSVIREIDVY KCEPSEESLP 60 VGYRFRPTDE VRINHYLKLK INGDEKQVSV IREINVWKCE PWDLPDKSAI KTNDEEWFFF 120 CPKDRKYQNG HQLNRVTVAG YWKATGKDSS IRSLRRTTVI GMKKTLVFYA GRASNGQRTN 180 WVIHEYRATR ILGERERTAA TESQQARKLN RKLIRRREKF GPNPRREALS KTLAIPESGI 240 VASSIEPGSN AEQVQNGRTH QKEANSLHQD PQYEKQELKT ALLLMSNGSS MHWVIKMVMK 300 MDAVEPFNIP VDPVALAIPE HAANFKFMAT ENFGCNIFEP KWFGGNNFPN ILEWVLLESS 360 RIDGDKTSKS KALVDSKSKS SKKHDGGGGE KIESSGGLVG EKENSKSSSK VKDSKSKSKS 420 KSSSKV

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MSLSKILAEE SLPVGYRLRP TDEELINHYL KLKINGDEKQ VSVIREIDVY KCEPSEESLP  60
VGYRFRPTDE VRINHYLKLK INGDEKQVSV IREINVWKCE PWDLPDKSAI KTNDEEWFFF  120
CPKDRKYQNG HQLNRVTVAG YWKATGKDSS IRSLRRTTVI GMKKTLVFYA GRASNGQRTN  180
WVIHEYRATR ILGERERTAA TESQQARKLN RKLIRRREKF GPNPRREALS KTLAIPESGI  240
VASSIEPGSN AEQVQNGRTH QKEANSLHQD PQYEKQELKT ALLLMSNGSS MHWVIKMVMK  300
MDAVEPFNIP VDPVALAIPE HAANFKFMAT ENFGCNIFEP KWFGGNNFPN ILEWVLLESS  360
RIDGDKTSKS KALVDSKSKS SKKHDGGGGE KIESSGGLVG EKENSKSSSK VKDSKSKSKS  420
KSSSKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	9e-60	NAC family protein