PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052088.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 337aa MW: 38343.3 Da PI: 6.7779

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.1	1.4e-23	78	168	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs++k + +k+k+++eit+rtfvC+keg++ +k++ + +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028052088.1 78 DFYNTYGGKVGFSIKKLYVHKNKHTKEITSRTFVCYKEGTQGIDKRD-PLVKFPRQEVRCGCRARFSIKLDRnLGKYVAIDFVEHHNHDLVP 168 6****************************************9999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MVDGGDGNGE RLADGRKSGC DAMMAEGRES GCDATMADGR ESGCDEVIEE NNVVIELANC 60 GWKPKLGMSF DSEQAAYDFY NTYGGKVGFS IKKLYVHKNK HTKEITSRTF VCYKEGTQGI 120 DKRDPLVKFP RQEVRCGCRA RFSIKLDRNL GKYVAIDFVE HHNHDLVPQE CIHMLPSQRK 180 ISTTQAIEVE LAAESGIPLR SAYELFGRKS GRRASLGFTK LDQKNYLRSK RQKDLEYGEA 240 GSVLQYFRKK SLENPSFYYV VQLDCEEQIS NIFWADAQMI MDYAQFGDVV TFDTTYKLNN 300 EHRPFGTFVG FNHHRETVLF GAALMYDETA KSFTWLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-66	FAR1 family protein