PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052116.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 321aa MW: 35032.4 Da PI: 5.9235

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	119	170	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +r+l+P + ++++ + a+i A++++k+L+ XP_028052116.1 119 QRMTHIAVERNRRKQMNEYLAVIRSLMPAS---YAQRGDQASIIGGAINFVKELE 170 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MALEAVIHPQ DPFSYACKEF TTVGGGGGAG GGGWGYGGDF SLLVEDKAFV GCNGNWDSSS 60 SSMMQNGKEH WDPNSSPEAC TDGDQLVPPM ESPAVATAAG RRKRRRTKSA KNKEDLESQR 120 MTHIAVERNR RKQMNEYLAV IRSLMPASYA QRGDQASIIG GAINFVKELE QLLQTLEAHR 180 TTQEPNNGFT QLFADFFTFP QYSTRPTTHC TNSSPAATVN EPTAEGRSAA FAEIEVSMVE 240 SHASLKILSK RRPRQLLKMV AGLQCLRLTV LHLNVTTTLD QMVLYSLSVK VEDGCQLSTV 300 DEIADAVNQL LGRIEDEAAL T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	106	RKRRR
2	102	107	RKRRRT
3	120	131	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-77	bHLH family protein