PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028052178.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 216aa    MW: 25029.5 Da    PI: 4.3808
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028052178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.8e-171055148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T+ Ed+l+ +++++lG++ W++Ia++++ gRt++++k++w+++l
   XP_028052178.1 10 RGKYTKAEDDLIMELHEKLGNE-WSAIAAKLP-GRTDNEIKNHWHTHL 55
                     899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MNYLRPNVKR GKYTKAEDDL IMELHEKLGN EWSAIAAKLP GRTDNEIKNH WHTHLKKRIK  60
ENQSTFELKQ KAIQISQSLA NLELQSHESP RSEINQVTDE LGSKDVTDEI YQQILESSPL  120
SSRELSSSDF SSSMTTDYAL LSDKNWVGED SMSSSESFEE SVRNFWIEPD FEDFSYQQNE  180
FSSNLAEGES MVPCFLDHDD DSIEWFHQIL KELPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.28e-29MYB_related family protein