PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052214.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 336aa MW: 37395.6 Da PI: 5.8134

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.2	1.9e-15	41	90	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr l+P++ ++K + a+ L +++eY+++Lq XP_028052214.1 41 RSKHSVTEQRRRSKINERFQMLRNLIPHS----DQKRDTASFLLEVIEYVQYLQ 90 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MKSAAAKGQQ HEEEEEDDDD DKDLLSKNRD GKNNDKVNSI RSKHSVTEQR RRSKINERFQ 60 MLRNLIPHSD QKRDTASFLL EVIEYVQYLQ EKVQKYEGSY QGLNSEPTKL MPWRNSHWRI 120 QSFVGHTQAI KNDSGPCSTF PGRFDENNIT TSISPVIHPI PNPHNPIESD NPSRDPDGKP 180 VEQQPVLPSK SIIMPPMPMP LQASVPASVQ GDDVIPHPLQ RPISDARSTE CPIMSDALSQ 240 QEELMIEGGT ISITSIYSQG LLNNLTQALQ SAGVDLSQAT ASVQIELGKR ANRGVTSGVP 300 IAKDPENTPS SHQPFGHFRD ASNGEDLDQA QKRLKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-95	bHLH family protein