PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052586.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 410aa MW: 45240.2 Da PI: 5.5088

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73	4.3e-23	124	175	4	56
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 ++W eLH+rFveaveqL ++A+P++ilelm++++Lt+++++SHLQkYR++ XP_028052586.1 124 VDWMLELHRRFVEAVEQL-SVDEAVPSRILELMGIHCLTRHNIASHLQKYRSH 175 68**************.9*****************************86 PP
2	Myb_DNA-binding	25.8	2.5e-08	126	173	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W e++ ++v+av+ql + +++I + mg +t+ ++ s++qky+ XP_028052586.1 126 WMLELHRRFVEAVEQLSVDeaVPSRILELMGiHCLTRHNIASHLQKYR 173 889***************************8889*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MLALSPLRTI NKDEIREEEM ESFSIRDNNV FADIPGEKLL DSIDFDDLFI GINDGDVLPD 60 LEMDPEILAE FQTSTGCEES EKVEVNNSRK EEEEEEENKV SSCSSFLNQG EEIVSKRDES 120 VADVDWMLEL HRRFVEAVEQ LSVDEAVPSR ILELMGIHCL TRHNIASHLQ KYRSHRKHSL 180 AREAEAASWS QRRQTYGGDG GGGGGGGGGG SKNIMSPWVV ASPTIGFPPM RPLQHFRPLH 240 VWGHPSMDPS LIHIWPKHLL PSPSPPPPPP PAAPWAHPTT HPSPPRPLLD SSFWHLHYQR 300 HKVPNSLTPG TPCFPPPLPT TRFGTPTVPG IPPNDAMYRL NPGIGVPPRL TGPHPPFDFH 360 PSKESIDAAI GDALSKPWLP LPLGLKPPSL DSVLGELQLH GIPKIPLNCA

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MLALSPLRTI NKDEIREEEM ESFSIRDNNV FADIPGEKLL DSIDFDDLFI GINDGDVLPD  60
LEMDPEILAE FQTSTGCEES EKVEVNNSRK EEEEEEENKV SSCSSFLNQG EEIVSKRDES  120
VADVDWMLEL HRRFVEAVEQ LSVDEAVPSR ILELMGIHCL TRHNIASHLQ KYRSHRKHSL  180
AREAEAASWS QRRQTYGGDG GGGGGGGGGG SKNIMSPWVV ASPTIGFPPM RPLQHFRPLH  240
VWGHPSMDPS LIHIWPKHLL PSPSPPPPPP PAAPWAHPTT HPSPPRPLLD SSFWHLHYQR  300
HKVPNSLTPG TPCFPPPLPT TRFGTPTVPG IPPNDAMYRL NPGIGVPPRL TGPHPPFDFH  360
PSKESIDAAI GDALSKPWLP LPLGLKPPSL DSVLGELQLH GIPKIPLNCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-61	G2-like family protein