PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053008.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 150aa    MW: 17299.9 Da    PI: 8.0518
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.63.2e-2636124290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     fYn+Y+ ++GFs+r+++ +k+k +++ +++ +vC+keg+++ +k++   ++++raetrtgC+a+l vk+++  gk++vt+++++HnH+l+
  XP_028053008.1  36 FYNAYGGRIGFSIRRDYCRKNKYTNQLICKLLVCNKEGFQKVDKRD-PLAKNPRAETRTGCEAQLYVKLDEgIGKFVVTDFKEKHNHDLV 124
                     9******************************************999.999*********************99***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MAFQFHFDMD IEVENHCAWK PKQGMPFDLE QCAYGFYNAY GGRIGFSIRR DYCRKNKYTN  60
QLICKLLVCN KEGFQKVDKR DPLAKNPRAE TRTGCEAQLY VKLDEGIGKF VVTDFKEKHN  120
HDLVSLECAH MLPSQRKISA TQAIELDLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.26e-24FAR1 family protein