PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053024.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 287aa    MW: 33195.2 Da    PI: 7.9787
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.18.1e-2531119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++   ++++r+e rtgC+a+l++k ++  +k+ v++++++HnH ++
  XP_028053024.1  31 DFYNSYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119
                     6********************9.6666****************9999.999******************99989**************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MKPNNHDNDG GECDWKPRVR MTFDTEQKVY DFYNSYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-66FAR1 family protein