PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053187.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 281aa    MW: 31431.4 Da    PI: 8.9913
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.28.2e-3362116358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     +vrY eClkNhA+s+Ggh++DGCgEfmp+ geeg+++alkCaAC+CHRnFHRre e
  XP_028053187.1  62 AVRYSECLKNHAVSTGGHVIDGCGEFMPA-GEEGSPEALKCAACDCHRNFHRREYE 116
                     69**************************9.999********************976 PP
2Homeobox148.6e-05218278157
                     TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +r Rt+ft+eq + +ee  e    k ++ ++ee e+   ++g++++  kvW +N ++ +kk
  XP_028053187.1 218 KRFRTKFTQEQKDGMEEIAErlgwKIQKQDEEEVEKFCGEVGVKKQAFKVWIHNNKQSMKK 278
                     789***************99776668888999999999999*****************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDRRRNEALD RHHHLHPQTH IPGKDSNPDP YPSPLPIATI SSPSNSKTPP LLPPPPPPPP  60
AAVRYSECLK NHAVSTGGHV IDGCGEFMPA GEEGSPEALK CAACDCHRNF HRREYEGVSQ  120
IKSAANSFYP YNPNRNSTIL RTTTTTHLTQ VPPPLPPPPP HHNNHRYSQG LSTSAFMMAF  180
GGASGAPAES SSEDLNMFHS YNVGTQQLMT QPPFSRKKRF RTKFTQEQKD GMEEIAERLG  240
WKIQKQDEEE VEKFCGEVGV KKQAFKVWIH NNKQSMKKKQ L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.14e-48ZF-HD family protein