PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053189.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 235aa    MW: 26265.8 Da    PI: 8.323
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-1176123455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L++l+P +    sk   Ka +Le+ ++Y++sLq
  XP_028053189.1  76 SHSLAERARREKINKKMKCLQDLVPGC----SKVTGKAGMLEEIINYVQSLQ 123
                     79************************9....556*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDHSFSLNSL ADQKNGRLNL NKRKAEVSSV LLVAEECKDK EIGRESEVAA AKRKRETSID  60
TDYIHDRARR GQAMDSHSLA ERARREKINK KMKCLQDLVP GCSKVTGKAG MLEEIINYVQ  120
SLQRQVEFLS MKLASLNPRI DFDIDSFFMK EFPAYVTSFP AAAAPSGMAN LAYLQFIQAQ  180
QVPQAAQTTT SSSMPAPNVF LDSLSCFPQD QTQPISTWGT DLHTLRNAEF RTNLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15293KRKRETSIDTDYIHDRARRGQAMDSHSLAERARREKINKKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-49bHLH family protein