PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053208.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 255aa    MW: 27650.5 Da    PI: 8.0873
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.4e-20126160135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_028053208.1 126 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MNSCSSSSHG NMVGGPCTCG VFHTQSNSFS MLFPKDFDEQ EADMYSFTSS SSSSSSSPVD  60
CTLSLGTPST RSCESAEKRV HHHDRLIPSF CWDILQSKKH TASSPPTHNK ASRGSGGGDS  120
LLARRCANCD TTSTPLWRNG PRGPKSLCNA CGIRFKKEER RATATAAAAT ITTTTASGGA  180
ASAIMDSHQR MLNNSSWDQH HHQQSQKMPC FSPAIGNEFR FINADSDRDI DTSIPFLSWH  240
RNIADSPSLV HGFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.11e-45GATA family protein