PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053292.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 250aa MW: 26859 Da PI: 6.9672

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.5	6e-35	92	175	5	82
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......eaesssssa 82 ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tgt++ + + + ss ss+ XP_028053292.1 92 ASSSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPTGPVstlagtLPLSSASSS 175 6789*********************************************************55555332222222111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MAAQAHADDD QEIQETQQQH PQQLPTSTTT IELHVSLSRN QWVQRPDSKF SSQDQPTHHH 60 LAPPTTTTTT PAAASSGLEI PHQLVATRKV GASSSKDRHT KVNGRGRRVR MPALCAARIF 120 QLTRELGHRS DGETIEWLLR HAEPSIIAAT GTGTVPTGPV STLAGTLPLS SASSSSRVAG 180 VSGGGHVPAG MFAVAPPSCR LNLSQPSPTM VLDLSGNEYR HMPFTALLLQ PATDEAEERR 240 QEEVLGEEKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-33	TCP family protein