PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053506.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 359aa MW: 41321.3 Da PI: 9.9714

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl XP_028053506.1 4 RQRWRPEEDALLRAYVKQYGPREWNLVSQRMNtpLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_028053506.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MKERQRWRPE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKDNNKVVDP 120 AEEGKYDRIL ETFAEKLVKE RPAPTFLMAT SNGGFLHPDP PTPPPPNLLP PWLSNSSTAS 180 NVRPPSPSVT LSLSPATVAP PPAIPWLQPD RGPDNNHRVL GNLPPHGSTP PPCGENLLIS 240 ELTECCRELE EGHRALVAHK KEVAWRLKRV ELQLESEKAC RRREKMEEIE SKVRALMEEQ 300 KAALDRIEAE YREQLVGLRR DAEAKEQKLA EQWAGKHVRL TKFLEQMGCR SRHSEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MKERQRWRPE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKDNNKVVDP  120
AEEGKYDRIL ETFAEKLVKE RPAPTFLMAT SNGGFLHPDP PTPPPPNLLP PWLSNSSTAS  180
NVRPPSPSVT LSLSPATVAP PPAIPWLQPD RGPDNNHRVL GNLPPHGSTP PPCGENLLIS  240
ELTECCRELE EGHRALVAHK KEVAWRLKRV ELQLESEKAC RRREKMEEIE SKVRALMEEQ  300
KAALDRIEAE YREQLVGLRR DAEAKEQKLA EQWAGKHVRL TKFLEQMGCR SRHSEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-149	MYB family protein