PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053539.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 933aa MW: 101590 Da PI: 5.1713

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.3	7.4e-14	564	601	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +CnCkkskClk+YC+C aag +C+e+C+C++C+N+ XP_028053539.1 564 CIHCNCKKSKCLKLYCDCLAAGIYCDETCTCQECFNRL 601 679*********************************85 PP
2	TCR	46.9	5.5e-15	651	689	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C kkYCeC++a++ Cs C+Ce+CkN XP_028053539.1 651 RHKRGCNCKKSMCSKKYCECYQANVGCSTGCRCEGCKNV 689 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 933 aa Download sequence
MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG 60 FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET 120 QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV 180 PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT 240 KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ 300 GYGDSSMTAI QASDRHVENI ILHDPKHSGM HRRCPWFEEA HQNIMTNSPG FGSPSNIVTN 360 SRLSTSHADL EVFESSCLEV SAASSGRQLI NLTQPMISHR NSGSKSAVLK PSGIGLHLNS 420 IINAMPIACG AIGSMKSAEK GYMNVEGRKL ICQQPANTKS GSILRNVREK VSASSEDGSY 480 ETQALAAITS LASQSSQIEK PSNDPALLKQ GEYQTTPCDK GKSISKRADA VEELNRSSPK 540 KKRKKAWTTN DDDDDDDDDD DYSCIHCNCK KSKCLKLYCD CLAAGIYCDE TCTCQECFNR 600 LDYEDTVQET RQQIESRNPL AFAPKIVQHV TDSPANNNGE NGNNSTPSSA RHKRGCNCKK 660 SMCSKKYCEC YQANVGCSTG CRCEGCKNVY GRKEEYDMTK DALSKGPIHE SFENTFDEKL 720 EMVSNQEGLL QTELCNPQNL MPLTPSFQFS NHWKDVSKSQ FSTRRSLPSP ASNVTFLPPH 780 GKSQRSPENS DSHGMLLKAR KHDEDVVSCY QGLDYSNAET VDGFSLRCDE LAIGNDLSTL 840 TNPPSTTIAS PLSSKLSDWT TISRSQSCPV SGHLSSIGSD EKLPDTMEDN MTEILKDTST 900 PLDALKVMSP PCIDSKDSTS QNVNDPEDCS SKK

Sequence ? help Back to Top

Protein Sequence Length: 933 aa Download sequence

MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG  60
FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET  120
QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV  180
PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT  240
KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ  300
GYGDSSMTAI QASDRHVENI ILHDPKHSGM HRRCPWFEEA HQNIMTNSPG FGSPSNIVTN  360
SRLSTSHADL EVFESSCLEV SAASSGRQLI NLTQPMISHR NSGSKSAVLK PSGIGLHLNS  420
IINAMPIACG AIGSMKSAEK GYMNVEGRKL ICQQPANTKS GSILRNVREK VSASSEDGSY  480
ETQALAAITS LASQSSQIEK PSNDPALLKQ GEYQTTPCDK GKSISKRADA VEELNRSSPK  540
KKRKKAWTTN DDDDDDDDDD DYSCIHCNCK KSKCLKLYCD CLAAGIYCDE TCTCQECFNR  600
LDYEDTVQET RQQIESRNPL AFAPKIVQHV TDSPANNNGE NGNNSTPSSA RHKRGCNCKK  660
SMCSKKYCEC YQANVGCSTG CRCEGCKNVY GRKEEYDMTK DALSKGPIHE SFENTFDEKL  720
EMVSNQEGLL QTELCNPQNL MPLTPSFQFS NHWKDVSKSQ FSTRRSLPSP ASNVTFLPPH  780
GKSQRSPENS DSHGMLLKAR KHDEDVVSCY QGLDYSNAET VDGFSLRCDE LAIGNDLSTL  840
TNPPSTTIAS PLSSKLSDWT TISRSQSCPV SGHLSSIGSD EKLPDTMEDN MTEILKDTST  900
PLDALKVMSP PCIDSKDSTS QNVNDPEDCS SKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	540	573	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
2	541	574	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
3	541	545	KKRKK
4	542	573	KRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	9e-56	CPP family protein