PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053570.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 429aa MW: 47658.2 Da PI: 5.1145

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29	1.9e-09	267	315	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i++++ L++l+P + sk Ka +L + ++Y+ sLq XP_028053570.1 267 NSHSLAERVRREKIRERMKFLQDLVPGC----SKITGKAVMLDEIINYVLSLQ 315 58************************....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
METSGNGESG PENRGGGLLD CSSLGNFKPL TSDKVLGMTV GSEPLYKHWN APNSSFSGGW 60 TPQNAEIVNS LMSSHNQIDS FSYTDSLLQS RGTDSTSRLV QFQSDQCLAE LEPNLPCFGG 120 GSFAEIDNFS ILSRCRWISN SSCSVDSINK SNIALMSQSE ADNYAQSPED CKVLEEGAMK 180 PSPDGKKRKR DYDDWSQFAR LENMKTEQEK DQCNRQQDEA KPKPKQKAVA NTCAQVVGKE 240 VKDSSTSGDA PKEDYVHVRA KRGQATNSHS LAERVRREKI RERMKFLQDL VPGCSKITGK 300 AVMLDEIINY VLSLQQQVEF LSMKLATVYP ETNAEHEQIL SRDIHHSQGS SAAILGELGM 360 SSYRKEILQG ALLATKTSNL ESLTMSNVPN IWENELHNIS QIDFISDLAP ENLESNGRFQ 420 NLIFLYIFQ

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

METSGNGESG PENRGGGLLD CSSLGNFKPL TSDKVLGMTV GSEPLYKHWN APNSSFSGGW  60
TPQNAEIVNS LMSSHNQIDS FSYTDSLLQS RGTDSTSRLV QFQSDQCLAE LEPNLPCFGG  120
GSFAEIDNFS ILSRCRWISN SSCSVDSINK SNIALMSQSE ADNYAQSPED CKVLEEGAMK  180
PSPDGKKRKR DYDDWSQFAR LENMKTEQEK DQCNRQQDEA KPKPKQKAVA NTCAQVVGKE  240
VKDSSTSGDA PKEDYVHVRA KRGQATNSHS LAERVRREKI RERMKFLQDL VPGCSKITGK  300
AVMLDEIINY VLSLQQQVEF LSMKLATVYP ETNAEHEQIL SRDIHHSQGS SAAILGELGM  360
SSYRKEILQG ALLATKTSNL ESLTMSNVPN IWENELHNIS QIDFISDLAP ENLESNGRFQ  420
NLIFLYIFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	8e-55	bHLH family protein